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organism

protein

Kordia algicida

EDP96968.1 - Probable nucleotide sugar dehydrogenase; COG1004 Predicted UDP-glucose 6-dehydrogenase. [a.k.a. KAOT1_17433, WP_007096021.1, 1.1.1.22, probable nucleotide sugar dehydrogenase, Probable nucleotide sugar dehydrogenase, ...]

Pseudomonas aeruginosa

udg - Probable nucleotide sugar dehydrogenase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). [a.k.a. PA2022, AAG05410.1, NP_250712, probable nucleotide sugar dehydrogenase, Probable nucleotide sugar dehydrogenase, ...]

Pseudomonas aeruginosa

PA3559 - Probable nucleotide sugar dehydrogenase; Product name confidence: Class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene). [a.k.a. AAG06947.1, 879827, NZ_QZGE01000001.1, probable nucleotide sugar dehydrogenase, Probable nucleotide sugar dehydrogenase, ...]

Robiginitalea biformata

EAR16560.1 - Probable nucleotide sugar dehydrogenase. [a.k.a. RB2501_06660, A4CI02, 1.1.1.22, probable nucleotide sugar dehydrogenase, Probable nucleotide sugar dehydrogenase, ...]

Salinibacter ruber

SRU_2709 - Probable nucleotide sugar dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721. [a.k.a. ABC46309.1, sru:SRU_2709, Nucleotide sugar dehydrogenase, probable nucleotide sugar dehydrogenase, Probable nucleotide sugar dehydrogenase, ...]

unidentified eubacterium SCB49

EDM45368.1 - Probable nucleotide sugar dehydrogenase; COG1004 Predicted UDP-glucose 6-dehydrogenase. [a.k.a. SCB49_06162, A6ELB8_9BACT, 1.1.1.22, probable nucleotide sugar dehydrogenase, Probable nucleotide sugar dehydrogenase, ...]

Fluviicola taffensis

AEA44045.1 - Nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR001732:IPR014026:IPR014027:IPR017476; KEGG: rbi:RB2501_06660 probable nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Probable nucleotide sugar dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, [...] [a.k.a. Fluta_2059, Nucleotide sugar dehydrogenase, 1.1.1.22]

Ralstonia pickettii 12J

Rpic_0783 - Nucleotide sugar dehydrogenase; KEGG: rso:RSc0913 probable UDP-glucose 6-dehydrogenase (UDG) oxidoreductase protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase. [a.k.a. ACD25934.1, IPR014027, IPR013332]

Photorhabdus laumondii

plu2500 - UDP-glucose 6-dehydrogenase; Unnamed protein product; Highly similar to probable nucleotide sugar dehydrogenase and UDP-glucose dehydrogenase. [a.k.a. CAE14874.1, IPR014027, Unnamed protein product]

10)

Yersinia pestis

YPO2174 - Putative nucleotide sugar dehydrogenase; Similar to Xanthomonas campestris UDP-glucose dehydrogenase TR:Q56812 (EMBL:X79772) (445 aa) fasta scores: E(): 0, 61.3% id in 349 aa, and to Pseudomonas aeruginosa probable nucleotide sugar dehydrogenase PA3559 TR:AAG06947 (EMBL:AE004776) (464 aa) fasta scores: E(): 0,64.9% id in 447 aa. [a.k.a. CAL20805.1, IPR014027, Q0WEZ0]

11)

Streptomyces coelicolor

SCO4773 - SCD63.05c, probable nucleotide-sugar dehydrogenase, len: 405 aa; similar to SW:WECC_ECOLI (EMBL:M87049) Escherichia coli UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (EC 1.1.1.-) WecC, 420 aa; fasta scores: opt: 565 z-score: 606.3 E(): 2.4e-26; 31.7% identity in 420 aa overlap. Contains Pfam match to entry PF00984 UDPG_MGDP_dh, UDP-glucose/GDP-mannose dehydrogenase family. [a.k.a. gene:17762422, CAB82012.1, IPR014027]

12)

Prevotella copri

EFB36223.1 - Nucleotide sugar dehydrogenase; KEGG: dps:DP0047 3.3e-94 wbpO; probable lipopolysaccharide biosynthesis protein (WbpO) K02474; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. [a.k.a. PREVCOP_04269, D1PAP4_9BACT, IPR014027]

13)

Bacteroides coprocola

EDV01239.1 - Nucleotide sugar dehydrogenase; KEGG: dps:DP0047 6.6e-135 wbpO; probable lipopolysaccharide biosynthesis protein (WbpO) K02474; COG: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Psort location: Cytoplasmic, score: 8.96. [a.k.a. BACCOP_01562, B3JI50_9BACE, IPR014027]

14)

Campylobacter jejuni NCTC 11168

Cj1329 - Original (2000) note: Cj1329, probable sugar-phosphate nucleotide transferase, len: 341 aa; similar in C-term (120 aa - end) to many predicted transferases, and to MPG1_YEAST mannose-1-phosphate guanyltransferase (361 aa), fasta scores; opt: 304 z-score: 343.2 E(): 8.1e-12, 28.9% identity in 225 aa overlap. N-term has some similarity to CBS domains in nucleotide dehydrogenases e.g. IMDH_BACSU inosine-5'-monophosphate dehydrogenase (513 aa), blastp scores; E=0.00034, 30% identity in 116 overlap. N-term contains 2x Pfam match to entry PF00571 CBS, CBS domain,C-term contains Pfam match to [...] [a.k.a. CAL35442.1, WP_002864264.1, CAL35442]

15)

Rhodopirellula baltica

sqdC - Sulfolipid biosynthesis protein SqdC; PMID: 10830266 best DB hits: BLAST: gb:AAF35290.1; AF194444_3 (AF194444) SqdC [Sinorhizobium meliloti]; E=2e-18 pir:D81275; probable nucleotide sugar dehydratase Cj1319 [imported]; E=3e-15 pir:D70696; probable dtdp-glucose 4 - Mycobacterium tuberculosis; E=9e-15 COG: Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-16 aq_1069; COG1087 UDP-glucose 4-epimerase; E=1e-12 MTH1789; COG1088 dTDP-D-glucose 4,6-dehydratase; E=3e-11 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.014 PF01370; NAD dependent epimerase/dehydratase; E=5.8e-16. [a.k.a. CAD74819.1, RB6464, Q7UQ86]

16)

Campylobacter jejuni NCTC 11168

Cj1319 - Original (2000) note: Cj1319, probable nucleotide sugar dehydratase, len: 323 aa; similar to e.g. TR:Q54116 (EMBL:L37354) thymidine diphosphoglucose 4,6-dehydratase (329 aa), fasta scores; opt: 526 z-score: 600.3 E(): 3.9e-26, 29.5% identity in 315 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00106 adh_short,Alcohol/other dehydrogenases, short chain type; Updated (2006) note: Pfam domain now altered to PF01370 NAD dependent epimerase/dehydratase family. Further support given to product function. No specific characterisation with acceptable identity score carried out yet. [...] [a.k.a. CAL35433.1, YP_002344709.1, Q0P8T8]

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